Welcome to the Worldwide Protein Data Bank
The Worldwide Protein Data Bank (wwPDB) consists of organizations that act as deposition, data processing and distribution centers for PDB data. 1 Members are: RCSB PDB (USA), PDBe (Europe) and PDBj (Japan), and BMRB (USA). The wwPDB's mission is to maintain a single PDB archive of macromolecular structural data that is freely and publicly available to the global community.
Reviewed on May 2st, 2013
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cooperacionunjfsc.wordpress.com Bases de Datos « Cooperación Faustiniana
The EM Data Bank (EMDB), the primary archive for experimentally-determined maps obtained using three-dimensional electron microscopy methods, will join the PDB archive ( ftp://ftp.wwpdb.org ) on 7 March 2012. The merger marks an important milestone in the Worldwide Protein Data Bank ‘s mission to... Read article
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umass.edu 2010 Protein Structural Bioinformatics Course
Begin Powerpoint Slides. Finding published molecules of interest: Each student: please find the PDB code of a molecule related to your research or interests. Recommended Characterstics Published in a good journal ( ). PDBLite.org Simple, one-slot search. Clear help. OCA Powerful and straightf... Read article
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ceeserver.cee.cornell.edu Computational Mechanics & Materials Group - Interface Structure DB
A route towards overcoming this inefficiency is to following the example of the biological community’s protein structure databank (PDB)( http://www.wwpdb.org ). The PDB allows researchers to easily share the atomic structures of proteins. Analogously, a web-based interface structure databank is c... Read article
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pdb.org RCSB PDB Newsletter | Fall 2010
For full news: www.thesgc.org/news/1000th_structure wwPDB News from wwpdb.org Get the Latest wwPDB News Subscribe to the wwPDB RSS (Really Simple Syndication) Feed to get the news related to the wwPDB as it is published. This feed pushes information to RSS readers so users can easily keep up to d... Read article
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pathema.jcvi.org BoNT Structures
WwPDB: Worldwide Protein Data Bank PDB Structures Read article
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biostat.jhsph.edu The RCSB Protein Data Bank
RCSB Home wwPDB Home Contact Us Help Did you find what you wanted? 24168 Structures Last Update: 03-Feb-2004 PDB Statistics Read article
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blogs.nature.com Nautilus: Protein Data Bank policies for disputed structures
WwPDB encourages all journals publishing macromolecular structures to stipulate accompanying submission of wwPDB validation reports. These will help editors and referees to assess the reliability of structural data and their interpretation. A few journals have already indicated their interest. Wi... Read article
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cell.com Cell - authors
Atomic coordinates fitted to EM maps must also be deposited to a wwPDB member site. The corresponding database IDs must be included in the manuscript. Authors must agree to release atomic coordinates and experimental data when the associated article is published. Additionally, Cell now recommends... Read article
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tamkucingku.blogspot.com Wishing: PROTEIN DATA BANK....(PDB)
PROTEIN DATA BANK....(PDB) The Protein Data Bank (PDB) is a repository for the 3-D structural data of large biological molecules, such as proteins and nucleic acids . (See also crystallographic database ). The data, typically obtained by X-ray crystallography or NMR spectroscopy and submitted by ... Read article
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peroxicats.org Peroxicats: PEROXidases as bioCATalystS
In other words, the vision of the eucalyptus kraft mill functioning as bio-refinery will be thoroughly discussed in this important event. You can visit the website ( www.5thicep.com ) to learn more about the Program and how to register. ff2011: 17th Intl. Symposium on Flavins and Flavoproteins No... Read article
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www-staff.lboro.ac.uk X-Ray Diffraction Laboratory
Before you can be authorised to use the diffraction equipment yourself, you must also complete the University Radiation Training and Safety forms. These can be found at: Crystallography Databases and Useful Links Crystallographic Databases Crystallographic data for small molecules are archived in... Read article
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lib.berkeley.edu Data Repositories: Microbiology & Medicine - Selected Web Sites - Bioscience Library - UC Berkeley
Protein Data Bank (PDB) of the Research Collaboratory for Structural Bioinformatics ( RCSB ) is an archive that contains information about experimentally-determined structures of proteins, nucleic acids, and complex assemblies. The RCSB PDB curates and annotates PDB data according to standards of... Read article
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dalloliogm.wordpress.com Cambiano le specificazioni del formato PDB, a partire da domani (1 agosto) « Bioinfo Blog!
Attenzione a tutti i colleghi bioinformatici strutturali: ho appena appreso dal mio blog gemello spagnolo (su questo post) che a partire da domani verrà lanciata una nuova versione del formato PDB, quello utilizzato dalle banche dati wwPDB e RCSB per descrivere la struttura di una molecola ottenu... Read article
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plosbiology.org PLoS Biology: ATP and MO25α Regulate the Conformational State of the STRADα Pseudokinase and Activation of the LKB1 Tumour Suppressor
Dose-response curves for calculating the Hill slope (H) of the data were fitted with the following equation: R = minimum+(maximum−minimum)/(1+10((logEC50−[STRAD])×H)) using GraphPad-PRISM software. Accession Numbers Coordinates and observed structure factor amplitudes have been deposited at the W... Read article
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sw-tools.pdb.org Pdb_extract | Online Manual
Pdb_extract is used to extract statistical information from the output files produced by many software for protein structure determination using Xray Crystallography and NMR methods. pdb_extract merges all the information into two mmCIF (macromolecular Crystallographic Information File) files. On... Read article
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